S rRNA amplicon sequencing for epidemiological 1 ! surveys of bacteria in wildlife : the importance of cleaning 2 ! post - sequencing data before estimating positivity , 3 ! prevalence and co - infection
نویسندگان
چکیده
Maxime Galan, Maria Razzauti, Emilie Bard, Maria Bernard, Carine Brouat, 5! Nathalie Charbonnel, Alexandre Dehne-Garcia, Anne Loiseau, Caroline Tatard, 6! Lucie Tamisier, Muriel Vayssier-Taussat, Hélène Vignes, Jean-François Cosson 7! 1: INRA, CBGP, Montferrier sur Lez, France 8! 2: INRA, EpiA, Clermont-Ferrand, France 9! 3: INRA, Sigenae, France 10! 4 : INRA, GABI, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France 11! 5: Ird, CBGP, Montferrier sur Lez, France 12! 6: INRA, Bipar, Maisons-Alfort, France 13! 7: CIRAD, AGAP, Montpellier, France 14! 15!
منابع مشابه
16 S rRNA amplicon sequencing for epidemiological 1 ! surveys of bacteria in wildlife : the importance of cleaning 2 ! post - sequencing data before estimating positivity
Maxime Galan, Maria Razzauti, Emilie Bard, Maria Bernard, Carine Brouat, 5! Nathalie Charbonnel, Alexandre Dehne-Garcia, Anne Loiseau, Caroline Tatard, 6! Lucie Tamisier, Muriel Vayssier-Taussat, Hélène Vignes, Jean-François Cosson 7! 1: INRA, CBGP, Montferrier sur Lez, France 8! 2: INRA, EpiA, Clermont-Ferrand, France 9! 3: INRA, Sigenae, France 10! 4 : INRA, GABI, AgroParisTech, Université Pa...
متن کاملS rRNA amplicon sequencing for epidemiological 1 ! surveys of bacteria in wildlife : the importance of cleaning 2 ! post - sequencing
Maxime Galan, Maria Razzauti, Emilie Bard, Maria Bernard, Carine Brouat, 5! Nathalie Charbonnel, Alexandre Dehne-Garcia, Anne Loiseau, Caroline Tatard, 6! Lucie Tamisier, Muriel Vayssier-Taussat, Hélène Vignes, Jean-François Cosson 7! 1: INRA, CBGP, Montferrier sur Lez, France 8! 2: INRA, EpiA, Clermont-Ferrand, France 9! 3: INRA, Sigenae, France 10! 4 : INRA, GABI, AgroParisTech, Université Pa...
متن کامل16S rRNA Amplicon Sequencing for Epidemiological Surveys of Bacteria in Wildlife
The human impact on natural habitats is increasing the complexity of human-wildlife interactions and leading to the emergence of infectious diseases worldwide. Highly successful synanthropic wildlife species, such as rodents, will undoubtedly play an increasingly important role in transmitting zoonotic diseases. We investigated the potential for recent developments in 16S rRNA amplicon sequenci...
متن کامل16 S rRNA amplicon sequencing for epidemiological 1 surveys of bacteria in wildlife : the importance of cleaning 2 post - sequencing data before estimating positivity , 3 prevalence and co - infection
18 Human impact on natural habitats is increasing the complexity of human-wildlife 19 interfaces and leading to the emergence of infectious diseases worldwide. Highly 20 successful synanthropic wildlife species, such as rodents, will undoubtedly play an 21 increasingly important role in transmitting zoonotic diseases. We investigated the 22 potential for recent developments in 16S rRNA amplicon...
متن کاملGenetic Characterization of Argas persicus From Iran by Sequencing of Mitochondrial Cytochrome Oxidase I (COX1) and 16s rRNA Genes
Background: Argas persicus has a great importance for health and veterinary, it can transmit many infectious agents such as Borrelia anserina (avian spirochetosis) and Aegyptianella pullorum. Distinguishing Argasidae due to close morphological relationship is difficult. OBJECTIVES: In the present study, we performed molecular analyses based on PCR and sequencing of Amplicon derived from 16S rRN...
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